HL_8R3V_117

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_117 not in the Motif Atlas

Homologous match to HL_5J7L_013

Geometric discrepancy: 0.1707

The information below is about HL_5J7L_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8R3V|1|A2|G|521
8R3V|1|A2|C|522
8R3V|1|A2|A|523
8R3V|1|A2|G|524
8R3V|1|A2|C|525
8R3V|1|A2|C|526
8R3V|1|A2|G7M|527
8R3V|1|A2|C|528

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain L2

Small ribosomal subunit protein uS12

Chain V2

messenger RNA