HL_8R3V_157

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UUUUGUAUAA

Length

10 nucleotides

Bulged bases

8R3V|1|72|A|574

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_157 not in the Motif Atlas

Homologous match to HL_5J7L_150

Geometric discrepancy: 0.0807

The information below is about HL_5J7L_150

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_28252.9

Basepair signature

cWW-tWH-F-F-F-F-F

Number of instances in this motif group

141

Unit IDs

8R3V|1|72|U|566
8R3V|1|72|U|567
8R3V|1|72|U|568
8R3V|1|72|U|569
8R3V|1|72|G|570
8R3V|1|72|U|571
8R3V|1|72|A|572
8R3V|1|72|U|573
8R3V|1|72|A|574
8R3V|1|72|A|575

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain o2

50S ribosomal protein L15