HL_8R55_030

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

UGACAAA

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_030 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.4826

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8R55|1|A|U|1174
8R55|1|A|G|1175
8R55|1|A|A|1176
8R55|1|A|C|1177
8R55|1|A|A|1178
8R55|1|A|A|1179
8R55|1|A|A|1180

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain B

30S ribosomal protein S2