HL_8R55_055

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CGUUAACG

Length

8 nucleotides

Bulged bases

8R55|1|X|U|591, 8R55|1|X|C|594

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_055 not in the Motif Atlas

Homologous match to HL_4WF9_017

Geometric discrepancy: 0.1649

The information below is about HL_4WF9_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50318.1

Basepair signature

cWW-cSH-F-F

Number of instances in this motif group

1

Unit IDs

8R55|1|X|C|588
8R55|1|X|G|589
8R55|1|X|U|590
8R55|1|X|U|591
8R55|1|X|A|592
8R55|1|X|A|593
8R55|1|X|C|594
8R55|1|X|G|595

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain e

Large ribosomal subunit protein uL13

Chain n

Large ribosomal subunit protein bL20

Chain o

Large ribosomal subunit protein bL21