HL_8R55_058

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_058 not in the Motif Atlas

Homologous match to HL_4WF9_020

Geometric discrepancy: 0.1046

The information below is about HL_4WF9_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

8R55|1|X|C|675
8R55|1|X|G|676
8R55|1|X|A|677
8R55|1|X|A|678
8R55|1|X|A|679
8R55|1|X|G|680

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 3

Large ribosomal subunit protein bL35

Chain i

50S ribosomal protein L15