HL_8R55_060

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_060 not in the Motif Atlas

Homologous match to HL_5J7L_154

Geometric discrepancy: 0.2185

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8R55|1|X|G|759
8R55|1|X|G|760
8R55|1|X|U|761
8R55|1|X|A|762
8R55|1|X|A|763
8R55|1|X|C|764
8R55|1|X|A|765
8R55|1|X|C|766

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain O

30S ribosomal protein S15