HL_8R55_066

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_066 not in the Motif Atlas

Homologous match to HL_7RQB_028

Geometric discrepancy: 0.2348

The information below is about HL_7RQB_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

8R55|1|X|G|1024
8R55|1|X|A|1025
8R55|1|X|A|1026
8R55|1|X|A|1027
8R55|1|X|C|1028
8R55|1|X|A|1029
8R55|1|X|G|1030
8R55|1|X|C|1031

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain n

Large ribosomal subunit protein bL20

Chain x

Large ribosomal subunit protein uL30