HL_8R55_092

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

8R55|1|X|G|2279

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_092 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.1241

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

8R55|1|X|C|2277
8R55|1|X|U|2278
8R55|1|X|G|2279
8R55|1|X|G|2280
8R55|1|X|G|2281
8R55|1|X|G|2282
8R55|1|X|C|2283
8R55|1|X|G|2284
8R55|1|X|G|2285

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain U

Transfer RNA; tRNA

Chain j

Large ribosomal subunit protein uL16

Chain u

Large ribosomal subunit protein bL27