HL_8R55_098

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

8R55|1|X|C|2435

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_098 not in the Motif Atlas

Homologous match to HL_4WF9_055

Geometric discrepancy: 0.0967

The information below is about HL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

8R55|1|X|C|2433
8R55|1|X|G|2434
8R55|1|X|C|2435
8R55|1|X|A|2436
8R55|1|X|U|2437
8R55|1|X|G|2438
8R55|1|X|G|2439
8R55|1|X|A|2440
8R55|1|X|A|2441
8R55|1|X|G|2442

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain i

50S ribosomal protein L15