HL_8R55_107

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

8R55|1|X|A|2845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_107 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.1093

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8R55|1|X|A|2844
8R55|1|X|A|2845
8R55|1|X|A|2846
8R55|1|X|G|2847
8R55|1|X|A|2848
8R55|1|X|U|2849
8R55|1|X|G|2850
8R55|1|X|A|2851
8R55|1|X|U|2852

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain a

Large ribosomal subunit protein uL3

Chain k

Large ribosomal subunit protein bL17