HL_8RCL_012

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GUGACAGCC

Length

9 nucleotides

Bulged bases

8RCL|1|72|G|329, 8RCL|1|72|A|330, 8RCL|1|72|C|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCL_012 not in the Motif Atlas

Homologous match to HL_5J7L_144

Geometric discrepancy: 0.1075

The information below is about HL_5J7L_144

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_27670.2

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

13

Unit IDs

8RCL|1|72|G|327
8RCL|1|72|U|328
8RCL|1|72|G|329
8RCL|1|72|A|330
8RCL|1|72|C|331
8RCL|1|72|A|332
8RCL|1|72|G|333
8RCL|1|72|C|334
8RCL|1|72|C|335

Current chains

Chain 72

23S ribosomal RNA

Nearby chains