HL_8RCL_063

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCL_063 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1717

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8RCL|1|72|C|2551
8RCL|1|72|OMU|2552
8RCL|1|72|G|2553
8RCL|1|72|U|2554
8RCL|1|72|U|2555
8RCL|1|72|C|2556
8RCL|1|72|G|2557

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain Y2

Transfer RNA; tRNA