HL_8RCM_007

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

8RCM|1|72|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCM_007 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.0812

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

8RCM|1|72|G|194
8RCM|1|72|A|195
8RCM|1|72|A|196
8RCM|1|72|A|197
8RCM|1|72|C|198
8RCM|1|72|A|199
8RCM|1|72|U|200
8RCM|1|72|C|201

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 12

50S ribosomal protein L28

Chain X2

Transfer RNA; tRNA

Chain o2

50S ribosomal protein L15