HL_8RCM_049
3D structure
- PDB id
- 8RCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Non-rotated disome interface class 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- GUAAC(3TD)AUAAC
- Length
- 11 nucleotides
- Bulged bases
- 8RCM|1|72|A|1913, 8RCM|1|72|C|1914
- QA status
- Modified nucleotides: 3TD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RCM_049 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.326
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8RCM|1|72|G|1910
8RCM|1|72|U|1911
8RCM|1|72|A|1912
8RCM|1|72|A|1913
8RCM|1|72|C|1914
8RCM|1|72|3TD|1915
8RCM|1|72|A|1916
8RCM|1|72|U|1917
8RCM|1|72|A|1918
8RCM|1|72|A|1919
8RCM|1|72|C|1920
Current chains
- Chain 72
- 23S ribosomal RNA
Nearby chains
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain V2
- messenger RNA
- Chain W
- Transfer RNA; tRNA
- Chain Y2
- Transfer RNA; tRNA
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