HL_8RCM_055

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

8RCM|1|72|A|2268, 8RCM|1|72|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCM_055 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0688

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

8RCM|1|72|C|2264
8RCM|1|72|U|2265
8RCM|1|72|A|2266
8RCM|1|72|A|2267
8RCM|1|72|A|2268
8RCM|1|72|G|2269
8RCM|1|72|A|2270
8RCM|1|72|G|2271
8RCM|1|72|U|2272
8RCM|1|72|A|2273
8RCM|1|72|A|2274
8RCM|1|72|C|2275
8RCM|1|72|G|2276

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain h2

50S ribosomal protein L16

Chain z2

50S ribosomal protein L27