HL_8RCM_056

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCM_056 not in the Motif Atlas

Homologous match to HL_5J7L_188

Geometric discrepancy: 0.0895

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8RCM|1|72|G|2303
8RCM|1|72|G|2304
8RCM|1|72|U|2305
8RCM|1|72|C|2306
8RCM|1|72|G|2307
8RCM|1|72|G|2308
8RCM|1|72|A|2309
8RCM|1|72|C|2310
8RCM|1|72|A|2311
8RCM|1|72|U|2312
8RCM|1|72|C|2313

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain e2

50S ribosomal protein L5