HL_8RCM_067

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

8RCM|1|72|G|2751, 8RCM|1|72|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCM_067 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0929

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

8RCM|1|72|C|2745
8RCM|1|72|U|2746
8RCM|1|72|G|2747
8RCM|1|72|A|2748
8RCM|1|72|A|2749
8RCM|1|72|A|2750
8RCM|1|72|G|2751
8RCM|1|72|C|2752
8RCM|1|72|A|2753
8RCM|1|72|U|2754
8RCM|1|72|C|2755
8RCM|1|72|U|2756
8RCM|1|72|A|2757
8RCM|1|72|A|2758
8RCM|1|72|G|2759

Current chains

Chain 72

23S ribosomal RNA

Nearby chains