3D structure

PDB id
8RCM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli paused disome complex (Non-rotated disome interface class 2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.59 Å

Loop

Sequence
CCUUCGGG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8RCM_095 not in the Motif Atlas
Geometric match to HL_4V90_032
Geometric discrepancy: 0.3331
The information below is about HL_4V90_032
Detailed Annotation
tRNA D-loop
Broad Annotation
No text annotation
Motif group
HL_20811.4
Basepair signature
cWW-cWS-F
Number of instances in this motif group
14

Unit IDs

8RCM|1|A1|C|1027
8RCM|1|A1|C|1028
8RCM|1|A1|U|1029
8RCM|1|A1|U|1030
8RCM|1|A1|C|1031
8RCM|1|A1|G|1032
8RCM|1|A1|G|1033
8RCM|1|A1|G|1034

Current chains

Chain A1
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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