HL_8RCS_055

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

8RCS|1|72|A|2268, 8RCS|1|72|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCS_055 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0714

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

8RCS|1|72|C|2264
8RCS|1|72|U|2265
8RCS|1|72|A|2266
8RCS|1|72|A|2267
8RCS|1|72|A|2268
8RCS|1|72|G|2269
8RCS|1|72|A|2270
8RCS|1|72|G|2271
8RCS|1|72|U|2272
8RCS|1|72|A|2273
8RCS|1|72|A|2274
8RCS|1|72|C|2275
8RCS|1|72|G|2276

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain h2

50S ribosomal protein L16

Chain z2

50S ribosomal protein L27