HL_8RCS_122

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

8RCS|1|A2|U|842, 8RCS|1|A2|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCS_122 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2498

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

8RCS|1|A2|C|840
8RCS|1|A2|C|841
8RCS|1|A2|U|842
8RCS|1|A2|U|843
8RCS|1|A2|G|844
8RCS|1|A2|A|845
8RCS|1|A2|G|846

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2

Chain R2

Small ribosomal subunit protein bS18