HL_8RCT_037

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CGACGGUUG

Length

9 nucleotides

Bulged bases

8RCT|1|72|A|1453, 8RCT|1|72|C|1454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_037 not in the Motif Atlas

Homologous match to HL_5J7L_169

Geometric discrepancy: 0.2043

The information below is about HL_5J7L_169

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_22622.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8RCT|1|72|C|1451
8RCT|1|72|G|1452
8RCT|1|72|A|1453
8RCT|1|72|C|1454
8RCT|1|72|G|1455
8RCT|1|72|G|1456
8RCT|1|72|U|1457
8RCT|1|72|U|1458
8RCT|1|72|G|1459

Current chains

Chain 72

23S ribosomal RNA

Nearby chains