HL_8RCT_055

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

8RCT|1|72|A|2268, 8RCT|1|72|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_055 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0723

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

8RCT|1|72|C|2264
8RCT|1|72|U|2265
8RCT|1|72|A|2266
8RCT|1|72|A|2267
8RCT|1|72|A|2268
8RCT|1|72|G|2269
8RCT|1|72|A|2270
8RCT|1|72|G|2271
8RCT|1|72|U|2272
8RCT|1|72|A|2273
8RCT|1|72|A|2274
8RCT|1|72|C|2275
8RCT|1|72|G|2276

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain h2

50S ribosomal protein L16

Chain z2

50S ribosomal protein L27