HL_8RCT_067

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

8RCT|1|72|G|2751, 8RCT|1|72|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_067 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.098

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

8RCT|1|72|C|2745
8RCT|1|72|U|2746
8RCT|1|72|G|2747
8RCT|1|72|A|2748
8RCT|1|72|A|2749
8RCT|1|72|A|2750
8RCT|1|72|G|2751
8RCT|1|72|C|2752
8RCT|1|72|A|2753
8RCT|1|72|U|2754
8RCT|1|72|C|2755
8RCT|1|72|U|2756
8RCT|1|72|A|2757
8RCT|1|72|A|2758
8RCT|1|72|G|2759

Current chains

Chain 72

23S ribosomal RNA

Nearby chains