HL_8RCT_079

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

UGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_079 not in the Motif Atlas

Homologous match to HL_5J7L_007

Geometric discrepancy: 0.1328

The information below is about HL_5J7L_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

8RCT|1|A1|U|296
8RCT|1|A1|G|297
8RCT|1|A1|A|298
8RCT|1|A1|G|299
8RCT|1|A1|A|300
8RCT|1|A1|G|301

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain D1

Small ribosomal subunit protein uS4

Chain E1

Small ribosomal subunit protein uS5

Chain L1

Small ribosomal subunit protein uS12

Chain Q1

Small ribosomal subunit protein uS17