HL_8RCT_101

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CUGCAACUCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_101 not in the Motif Atlas

Homologous match to HL_5J7L_028

Geometric discrepancy: 0.211

The information below is about HL_5J7L_028

Detailed Annotation

T-loop with 3 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_02887.3

Basepair signature

cWW-tWH-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8RCT|1|A1|C|1314
8RCT|1|A1|U|1315
8RCT|1|A1|G|1316
8RCT|1|A1|C|1317
8RCT|1|A1|A|1318
8RCT|1|A1|A|1319
8RCT|1|A1|C|1320
8RCT|1|A1|U|1321
8RCT|1|A1|C|1322
8RCT|1|A1|G|1323

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain M1

Small ribosomal subunit protein uS13

Chain N1

Small ribosomal subunit protein uS14

Chain S1

Small ribosomal subunit protein uS19