HL_8RCT_122

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

8RCT|1|A2|U|842, 8RCT|1|A2|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_122 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.2467

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8RCT|1|A2|C|840
8RCT|1|A2|C|841
8RCT|1|A2|U|842
8RCT|1|A2|U|843
8RCT|1|A2|G|844
8RCT|1|A2|A|845
8RCT|1|A2|G|846

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2

Chain R2

Small ribosomal subunit protein bS18