HL_8RCT_129

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

8RCT|1|A2|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_129 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.0979

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8RCT|1|A2|G|1089
8RCT|1|A2|U|1090
8RCT|1|A2|U|1091
8RCT|1|A2|A|1092
8RCT|1|A2|A|1093
8RCT|1|A2|G|1094
8RCT|1|A2|U|1095
8RCT|1|A2|C|1096

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain B2

Small ribosomal subunit protein uS2

Chain G2

30S ribosomal protein S7

Chain U2

30S ribosomal protein S21