HL_8RCT_132

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_132 not in the Motif Atlas

Homologous match to HL_4LFB_028

Geometric discrepancy: 0.2541

The information below is about HL_4LFB_028

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

8RCT|1|A2|C|1265
8RCT|1|A2|G|1266
8RCT|1|A2|C|1267
8RCT|1|A2|G|1268
8RCT|1|A2|A|1269
8RCT|1|A2|G|1270

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain M2

Small ribosomal subunit protein uS13

Chain S2

Small ribosomal subunit protein uS19