HL_8RDW_017

3D structure

PDB id

8RDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.74 Å

Loop

Sequence

AUUUAU

Length

6 nucleotides

Bulged bases

8RDW|1|Z2|A|532

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RDW_017 not in the Motif Atlas

Homologous match to HL_7RQB_017

Geometric discrepancy: 0.1976

The information below is about HL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDW|1|Z2|A|528
8RDW|1|Z2|U|529
8RDW|1|Z2|U|530
8RDW|1|Z2|U|531
8RDW|1|Z2|A|532
8RDW|1|Z2|U|533

Current chains

Chain Z2

23S rRNA

Nearby chains