HL_8RDW_044

3D structure

PDB id

8RDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.74 Å

Loop

Sequence

GUCUC

Length

5 nucleotides

Bulged bases

8RDW|1|Z2|C|1718

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RDW_044 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3347

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

8RDW|1|Z2|G|1712
8RDW|1|Z2|U|1717
8RDW|1|Z2|C|1718
8RDW|1|Z2|U|1719
8RDW|1|Z2|C|1720

Current chains

Chain Z2

23S rRNA

Nearby chains