HL_8RDW_050
3D structure
- PDB id
- 8RDW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.74 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 8RDW|1|Z2|U|1941
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RDW_050 not in the Motif Atlas
- Homologous match to HL_5J7L_182
- Geometric discrepancy: 0.0571
- The information below is about HL_5J7L_182
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20167.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8RDW|1|Z2|G|1935
8RDW|1|Z2|G|1936
8RDW|1|Z2|U|1937
8RDW|1|Z2|A|1938
8RDW|1|Z2|A|1939
8RDW|1|Z2|G|1940
8RDW|1|Z2|U|1941
8RDW|1|Z2|U|1942
8RDW|1|Z2|C|1943
Current chains
- Chain Z2
- 23S rRNA
Nearby chains
- Chain B
- Methyl-accepting chemotaxis protein
- Chain Je
- Large ribosomal subunit protein uL14
- Chain iN
- Small subunit ribosomal RNA; SSU rRNA
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