HL_8RL2_021
3D structure
- PDB id
- 8RL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- CAUGGAAGUCG
- Length
- 11 nucleotides
- Bulged bases
- 8RL2|1|L5|A|1984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RL2_021 not in the Motif Atlas
- Homologous match to HL_8C3A_027
- Geometric discrepancy: 0.2325
- The information below is about HL_8C3A_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19210.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8RL2|1|L5|C|1978
8RL2|1|L5|A|1979
8RL2|1|L5|U|1980
8RL2|1|L5|G|1981
8RL2|1|L5|G|1982
8RL2|1|L5|A|1983
8RL2|1|L5|A|1984
8RL2|1|L5|G|1985
8RL2|1|L5|U|1986
8RL2|1|L5|C|1987
8RL2|1|L5|G|1988
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CB
- Nucleolar GTP-binding protein 2
- Chain CD
- GTP-binding protein 4
- Chain CG
- Notchless protein homolog 1
- Chain Lt
- Large ribosomal subunit protein uL11
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