HL_8RL2_059

3D structure

PDB id

8RL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 5

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

8RL2|1|L5|U|5026, 8RL2|1|L5|C|5027

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RL2_059 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3285

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8RL2|1|L5|C|5021
8RL2|1|L5|U|5022
8RL2|1|L5|C|5023
8RL2|1|L5|C|5024
8RL2|1|L5|C|5025
8RL2|1|L5|U|5026
8RL2|1|L5|C|5027
8RL2|1|L5|G|5028

Current chains

Chain L5

28S rRNA

Nearby chains