HL_8RR3_002
3D structure
- PDB id
- 8RR3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial RNase Z complex with ELAC2-D550N catalytic mutant and tRNA-Gln precursor (Composite model)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUCGAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RR3_002 not in the Motif Atlas
- Homologous match to HL_4V90_034
- Geometric discrepancy: 0.1704
- The information below is about HL_4V90_034
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
8RR3|1|T|G|52
8RR3|1|T|U|53
8RR3|1|T|U|54
8RR3|1|T|C|55
8RR3|1|T|G|56
8RR3|1|T|A|57
8RR3|1|T|U|58
8RR3|1|T|U|59
8RR3|1|T|C|60
Current chains
- Chain T
- Human mitochondrial tRNA-Gln precursor with 3' trailer RNA
Nearby chains
- Chain E
- Zinc phosphodiesterase ELAC protein 2
- Chain F
- tRNA methyltransferase 10 homolog C
Coloring options: