HL_8RXH_015

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

G(PSU)CUUGA(A2M)AC(A2M)C

Length

12 nucleotides

Bulged bases

8RXH|1|L1|C|680

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|L1|G|671
8RXH|1|L1|PSU|672
8RXH|1|L1|C|673
8RXH|1|L1|U|674
8RXH|1|L1|U|675
8RXH|1|L1|G|676
8RXH|1|L1|A|677
8RXH|1|L1|A2M|678
8RXH|1|L1|A|679
8RXH|1|L1|C|680
8RXH|1|L1|A2M|681
8RXH|1|L1|C|682

Current chains

Chain L1

LSUa_rRNA_chain_1

Nearby chains

Chain L2

Large subunit ribosomal RNA; LSU rRNA

Chain LB

Putative ribosomal protein L3

Chain LL

Putative 60S ribosomal protein L27A/L29

Chain Lf

60S ribosomal protein L32