HL_8RXH_029

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

UACAGUUGGACCCAACCGAA

Length

20 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|L1|U|1280
8RXH|1|L1|A|1281
8RXH|1|L1|C|1286
8RXH|1|L1|A|1287
8RXH|1|L1|G|1288
8RXH|1|L1|U|1289
8RXH|1|L1|U|1290
8RXH|1|L1|G|1291
8RXH|1|L1|G|1292
8RXH|1|L1|A|1293
8RXH|1|L1|C|1294
8RXH|1|L1|C|1341
8RXH|1|L1|C|1342
8RXH|1|L1|A|1343
8RXH|1|L1|A|1344
8RXH|1|L1|C|1345
8RXH|1|L1|C|1346
8RXH|1|L1|G|1347
8RXH|1|L1|A|1348
8RXH|1|L1|A|1349

Current chains

Chain L1

LSUa_rRNA_chain_1

Nearby chains

Chain L4

Large subunit ribosomal RNA; LSU rRNA

Chain LR

60S ribosomal protein L18a

Chain Lm

Ubiquitin-60S ribosomal protein L40