HL_8RXH_036
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GGAUUAUAUUC
- Length
- 11 nucleotides
- Bulged bases
- 8RXH|1|L1|G|1750, 8RXH|1|L1|U|1757, 8RXH|1|L1|U|1758
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_036 not in the Motif Atlas
- Homologous match to HL_8C3A_035
- Geometric discrepancy: 0.4441
- The information below is about HL_8C3A_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35087.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8RXH|1|L1|G|1749
8RXH|1|L1|G|1750
8RXH|1|L1|A|1751
8RXH|1|L1|U|1752
8RXH|1|L1|U|1753
8RXH|1|L1|A|1754
8RXH|1|L1|U|1755
8RXH|1|L1|A|1756
8RXH|1|L1|U|1757
8RXH|1|L1|U|1758
8RXH|1|L1|C|1759
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L3
- SR1_chain_3
- Chain LQ
- Putative 60S ribosomal protein L19
- Chain LV
- Putative 60S ribosomal protein L23a
- Chain Lh
- Putative 60S ribosomal protein L34
- Chain Lk
- Putative ribosomal protein L38
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