HL_8RXH_042
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CCAAGUG
- Length
- 7 nucleotides
- Bulged bases
- 8RXH|1|L2|U|415
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_042 not in the Motif Atlas
- Geometric match to HL_4QK9_001
- Geometric discrepancy: 0.321
- The information below is about HL_4QK9_001
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_34789.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 399
Unit IDs
8RXH|1|L2|C|410
8RXH|1|L2|C|411
8RXH|1|L2|A|412
8RXH|1|L2|A|413
8RXH|1|L2|G|414
8RXH|1|L2|U|415
8RXH|1|L2|G|416
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LA
- Putative 60S ribosomal protein L2
- Chain LG
- 60S ribosomal protein L7a
- Chain LM
- Ribosomal protein L15
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