HL_8RXH_043
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GACGAGAU(PSU)C
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_043 not in the Motif Atlas
- Geometric match to HL_8KAL_008
- Geometric discrepancy: 0.3414
- The information below is about HL_8KAL_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8RXH|1|L2|G|464
8RXH|1|L2|A|465
8RXH|1|L2|C|466
8RXH|1|L2|G|467
8RXH|1|L2|A|468
8RXH|1|L2|G|469
8RXH|1|L2|A|470
8RXH|1|L2|U|471
8RXH|1|L2|PSU|472
8RXH|1|L2|C|473
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Li
- Putative 60S Ribosomal protein L36
- Chain Lp
- Putative 60S ribosomal protein L44
- Chain S4
- Transfer RNA; tRNA
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