HL_8RXH_048

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8RXH|1|L2|U|796

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RXH_048 not in the Motif Atlas

Geometric match to HL_4V9F_044

Geometric discrepancy: 0.0866

The information below is about HL_4V9F_044

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

63

Unit IDs

8RXH|1|L2|C|794
8RXH|1|L2|U|795
8RXH|1|L2|U|796
8RXH|1|L2|C|797
8RXH|1|L2|G|798
8RXH|1|L2|G|799

Current chains

Chain L2

LSUb_rRNA_chain_2

Nearby chains

Chain LG

60S ribosomal protein L7a