HL_8RXH_051
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CUG(OMG)GGCGG
- Length
- 9 nucleotides
- Bulged bases
- 8RXH|1|L2|G|1045
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_051 not in the Motif Atlas
- Homologous match to HL_8C3A_055
- Geometric discrepancy: 0.0995
- The information below is about HL_8C3A_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
8RXH|1|L2|C|1043
8RXH|1|L2|U|1044
8RXH|1|L2|G|1045
8RXH|1|L2|OMG|1046
8RXH|1|L2|G|1047
8RXH|1|L2|G|1048
8RXH|1|L2|C|1049
8RXH|1|L2|G|1050
8RXH|1|L2|G|1051
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LN
- Putative 60S ribosomal protein L10
- Chain Lb
- 60S ribosomal protein L29
- Chain S3
- Transfer RNA; tRNA
Coloring options: