3D structure

PDB id
8RXH (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Experimental method
ELECTRON MICROSCOPY
Resolution
2.93 Å

Loop

Sequence
GCUCUUACUGUC
Length
12 nucleotides
Bulged bases
8RXH|1|L3|C|170
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8RXH|1|L3|G|156
8RXH|1|L3|C|157
8RXH|1|L3|U|158
8RXH|1|L3|C|159
8RXH|1|L3|U|160
8RXH|1|L3|U|168
8RXH|1|L3|A|169
8RXH|1|L3|C|170
8RXH|1|L3|U|171
8RXH|1|L3|G|172
8RXH|1|L3|U|173
8RXH|1|L3|C|174

Current chains

Chain L3
SR1_chain_3

Nearby chains

Chain L1
Large subunit ribosomal RNA; LSU rRNA
Chain LQ
Putative 60S ribosomal protein L19
Chain LU
Putative 60S ribosomal protein L22
Chain Lk
Putative ribosomal protein L38

Coloring options:

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