HL_8RXH_071
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CGAACG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_071 not in the Motif Atlas
- Geometric match to HL_4V9F_067
- Geometric discrepancy: 0.1502
- The information below is about HL_4V9F_067
- Detailed Annotation
- Ribsomal LSU H95
- Broad Annotation
- Ribsomal LSU H95
- Motif group
- HL_12125.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
8RXH|1|L4|C|96
8RXH|1|L4|G|97
8RXH|1|L4|A|98
8RXH|1|L4|A|99
8RXH|1|L4|C|100
8RXH|1|L4|G|101
Current chains
- Chain L4
- SR2_chain_4
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L3
- SR1_chain_3
- Chain L5
- SR4_chain_5
- Chain LQ
- Putative 60S ribosomal protein L19
- Chain LU
- Putative 60S ribosomal protein L22
- Chain Le
- Putative 60S ribosomal subunit protein L31
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