HL_8RXH_073
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CCAAACGAG
- Length
- 9 nucleotides
- Bulged bases
- 8RXH|1|L5|C|15
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_073 not in the Motif Atlas
- Geometric match to HL_5TBW_070
- Geometric discrepancy: 0.1453
- The information below is about HL_5TBW_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.4
- Basepair signature
- cWW-cSW-F-F-F-cWW
- Number of instances in this motif group
- 9
Unit IDs
8RXH|1|L5|C|14
8RXH|1|L5|C|15
8RXH|1|L5|A|16
8RXH|1|L5|A|17
8RXH|1|L5|A|18
8RXH|1|L5|C|19
8RXH|1|L5|G|20
8RXH|1|L5|A|21
8RXH|1|L5|G|22
Current chains
- Chain L5
- SR4_chain_5
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L4
- Large subunit ribosomal RNA; LSU rRNA
- Chain LB
- Putative ribosomal protein L3
- Chain LT
- Putative 60S ribosomal protein L17
- Chain Le
- Putative 60S ribosomal subunit protein L31
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