HL_8RXH_076

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases

8RXH|1|L6|U|39

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RXH_076 not in the Motif Atlas

Geometric match to HL_6MSF_002

Geometric discrepancy: 0.1161

The information below is about HL_6MSF_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8RXH|1|L6|C|38
8RXH|1|L6|U|39
8RXH|1|L6|C|40
8RXH|1|L6|G|41

Current chains

Chain L6

SR6_chain_6

Nearby chains

Chain LH

Putative 60S ribosomal protein L13a

Chain LK

Putative 40S ribosomal protein L14