HL_8RXH_105

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

UUUACGGG

Length

8 nucleotides

Bulged bases

8RXH|1|S1|C|1398, 8RXH|1|S1|G|1400

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|S1|U|1369
8RXH|1|S1|U|1370
8RXH|1|S1|U|1371
8RXH|1|S1|A|1397
8RXH|1|S1|C|1398
8RXH|1|S1|G|1399
8RXH|1|S1|G|1400
8RXH|1|S1|G|1401

Current chains

Chain S1

SSU_rRNA_chain_S1

Nearby chains

Chain SA

40S ribosomal protein S3a

Chain Sc

Putative 40S ribosomal protein S27-1