HL_8RXH_114

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

UGAUCAAAAG

Length

10 nucleotides

Bulged bases

8RXH|1|S1|U|1918, 8RXH|1|S1|C|1919

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|S1|U|1915
8RXH|1|S1|G|1916
8RXH|1|S1|A|1917
8RXH|1|S1|U|1918
8RXH|1|S1|C|1919
8RXH|1|S1|A|1920
8RXH|1|S1|A|1921
8RXH|1|S1|A|1922
8RXH|1|S1|A|1923
8RXH|1|S1|G|1924

Current chains

Chain S1

SSU_rRNA_chain_S1

Nearby chains

Chain SR

Putative 40S ribosomal protein S18

Chain SX

40S ribosomal protein S19-like protein