HL_8RXH_126
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AUUAAAU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RXH|1|S4|A|31
8RXH|1|S4|U|32
8RXH|1|S4|U|33
8RXH|1|S4|A|36
8RXH|1|S4|A|37
8RXH|1|S4|A|38
8RXH|1|S4|U|39
Current chains
- Chain S4
- E-site_tRNA_chain_S4
Nearby chains
- Chain S1
- Small subunit ribosomal RNA; SSU rRNA
- Chain S3
- Transfer RNA; tRNA
- Chain S5
- mRNA_chain_S5
- Chain SH
- 40S ribosomal protein S5
- Chain SO
- 40S ribosomal protein S14
- Chain Sd
- Putative 40S ribosomal protein S33
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