HL_8RXH_133
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- (PSU)GAACAAAUCA
- Length
- 11 nucleotides
- Bulged bases
- 8RXH|1|L2|A|1215
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_133 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.3422
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
8RXH|1|L2|PSU|1213
8RXH|1|L2|G|1214
8RXH|1|L2|A|1215
8RXH|1|L2|A|1216
8RXH|1|L2|C|1217
8RXH|1|L2|A|1218
8RXH|1|L2|A|1219
8RXH|1|L2|A|1220
8RXH|1|L2|U|1221
8RXH|1|L2|C|1222
8RXH|1|L2|A|1223
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- Putative 60S ribosomal protein L13
- Chain LL
- Putative 60S ribosomal protein L27A/L29
- Chain Li
- Putative 60S Ribosomal protein L36
- Chain Lp
- Putative 60S ribosomal protein L44
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