HL_8SCB_002
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CCUAACACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8SCB_002 not in the Motif Atlas
- Homologous match to HL_6UFM_002
- Geometric discrepancy: 0.1344
- The information below is about HL_6UFM_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
8SCB|1|2|C|31
8SCB|1|2|C|32
8SCB|1|2|U|33
8SCB|1|2|A|34
8SCB|1|2|A|35
8SCB|1|2|C|36
8SCB|1|2|A|37
8SCB|1|2|C|38
8SCB|1|2|G|39
Current chains
- Chain 2
- P_tRNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain QQ
- uS9
- Chain hh
- mRNA
- Chain ii
- Eukaryotic peptide chain release factor subunit 1
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